ERFs of vitamins: Difference between revisions

From Opasnet
Jump to navigation Jump to search
 
(7 intermediate revisions by the same user not shown)
Line 9: Line 9:
== Answer ==
== Answer ==


<rcode embed=1>
#This is code Op_en6866/ on page [[ERFs of vitamins]]
library(OpasnetUtils)
objects.latest("Op_en6866", code_name="initiate")
ERF_vit <- EvalOutput(ERF_vit)
threshold_vit <- EvalOutput(threshold_vit)
cat("ERF_vit\n")
oprint(summary(ERF_vit))
cat("threshold_vit\n")
oprint(summary(threshold_vit))
</rcode>


== Rationale ==
== Rationale ==
Line 14: Line 27:
=== Data ===
=== Data ===


<t2b index="Exposure agent,Trait,Response metric,Exposure route,Exposure metric,Exposure unit,ERF parameter,Observation" locations="Threshold,ERF" desc="Description" unit="-">
* Response metric: 1 if the recommendation is not met, 0 if it is met.
Vitamin D|Recommendation||Ingestion|Daily intake|ug /d|Step|7.5|100|
 
<t2b index="Exposure agent,Response,Exposure,Exposure unit,ER function,Scaling,Observation" locations="Threshold,ERF" desc="Description" unit="-">
Vitamin D|Vitamin D recommendation|Daily intake|ug /d|Step|None|10|100|Finnish nutrition recommendations 2014
</t2b>
</t2b>
Finnish nutrition recommendations 2014<ref>Valtion ravitsemusneuvottelukunta. Suomalaiset ravitsemussuositukset 2014. [Finnish nutrition recommendations 2014] [https://www.evira.fi/globalassets/vrn/pdf/ravitsemussuositukset_2014_fi_web.3_es-1.pdf]</ref>


=== Calculations ===
=== Calculations ===


<rcode embed=1 label="Initiate variables" name="initiate">
<rcode name="ERF_vit2" label="Initiate ERF_vit" embed=1>
# This is code Op_en6866/ERF_vit2 on page [[ERF of vitamins]]
# Note! This version has ERF and threshold in the same ovariable.
 
library(OpasnetUtils)
 
ERF_vit <- Ovariable("ERF_vit", ddata = "Op_en6866")
colnames(ERF_vit@data) <- gsub(" ", "_", colnames(ERF_vit@data))
 
objects.store(ERF_vit)
cat("Ovariable ERF_vit stored.\n")
</rcode>
 
<rcode embed=1 label="Initiate ovariables (for developers only)" name="initiate">
# This is code Op_en6866/initiate on page [[ERFs of vitamins]]


library(OpasnetUtils)
library(OpasnetUtils)


d <- opbase.data("Op_en6866")
d <- opbase.data("Op_en6866")[-1] #Remove Obs
d$Obs <- NULL
colnames(d) <- gsub(" ", "_", colnames(d))
colnames(d) <- gsub(" ", "_", colnames(d))
d$Exposure_agent <- gsub(" ", "_", d$Exposure_agent)
d$Result <- ifelse(d$Result == "", "0", as.character(d$Result))
d$Result <- ifelse(d$Result == "", "0", as.character(d$Result))


ERF <- Ovariable("ERF", data = d[d$Observation == "ERF", colnames(d) != "Observation"])
ERF_vit <- Ovariable("ERF_vit", data = d[d$Observation == "ERF", colnames(d) != "Observation"])


threshold <- Ovariable("Threshold", data = d[d$Observation == "Threshold", colnames(d) != "Observation"])
threshold_vit <- Ovariable("threshold_vit", data = d[d$Observation == "Threshold", colnames(d) != "Observation"])


objects.store(ERF, threshold)
objects.store(ERF_vit, threshold_vit)
cat("Ovariables ERF, threshold stored.\n")
cat("Ovariables ERF_vit, threshold_vit stored.\n")
</rcode>
</rcode>


==See also==
==See also==


==Keywords==
* [[Exposure-response function]]


==References==
==References==
Line 46: Line 75:
<references/>
<references/>


==Related files==
* [http://www.sciencedirect.com/science/article/pii/S0959804914001245 Serum 25-hydroxyvitamin D levels and survival in colorectal and breast cancer patients: Systematic review and meta-analysis of prospective cohort studies]
* [http://www.ncbi.nlm.nih.gov/pubmed/18387220 New insights into the role of vitamin D and calcium in osteoporosis management: an expert roundtable discussion.]
* [http://www.ncbi.nlm.nih.gov/pubmed/18430394 Vitamin D Therapy]
* [http://www.ncbi.nlm.nih.gov/pubmed/22695493 Vitamin D insufficiency and chronic diseases: hype and reality.]
* [http://www.ncbi.nlm.nih.gov/pubmed/2655904 Osteoporosis - a review]
* [http://www.ncbi.nlm.nih.gov/pubmed/10232622 Vitamin D supplementation, 25-hydroxyvitamin D concentrations, and safety.]
* [http://www.ncbi.nlm.nih.gov/pubmed/20511052 Low vitamin D status: definition, prevalence, consequences, and correction.]

Latest revision as of 06:59, 16 July 2019



Question

What are exposure-response functions to vitamins?

Answer

+ Show code

Rationale

Data

  • Response metric: 1 if the recommendation is not met, 0 if it is met.
ERFs of vitamins: Difference between revisions(-)
ObsExposure agentResponseExposureExposure unitER functionScalingThresholdERFDescription
1Vitamin DVitamin D recommendationDaily intakeug /dStepNone10100Finnish nutrition recommendations 2014

Finnish nutrition recommendations 2014[1]

Calculations

+ Show code

+ Show code

See also

References

  1. Valtion ravitsemusneuvottelukunta. Suomalaiset ravitsemussuositukset 2014. [Finnish nutrition recommendations 2014] [1]